STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN30766.1ABC transporter permease. (270 aa)    
Predicted Functional Partners:
KRN30765.1
ABC transporter ATP-binding protein.
 
 0.999
KRN30764.1
ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.993
KRN26931.1
ABC transporter periplasmic protein.
 
 
 0.975
KRN26763.1
ABC transporter-like protein.
  
 
 0.880
KRN29967.1
Iron-dependent repressor.
  
 
 0.730
KRN29905.1
Iron-siderophore uptake ABC system ATP-binding component.
    
 0.618
KRN27195.1
Glycerol-3-phosphate-transporting ATPase; Belongs to the ABC transporter superfamily.
    
  0.580
KRN27203.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.580
KRN29988.1
Hypothetical protein.
   
  
 0.545
KRN27605.1
Manganese transporter mntH (Hop-inducible cation transporter).
   
  
 0.545
Your Current Organism:
Lactobacillus mali
NCBI taxonomy Id: 1618
Other names: ATCC 27053, ATCC 27304 [[Lactobacillus yamanashiensis subsp. yamanashiensis]], CCUG 30141, CCUG 32228, CIP 103142, DSM 20444, KCTC 3596, L. mali, LMG 6899, LMG:6899, Lactobacillus yamanashiensis, Lactobacillus yamanashiensis subsp. mali, Lactobacillus yamanashiensis subsp. yamanashiensis, NBRC 102159, NCIB 10560, NCIB:10560, NCIMB 10560, NRRL B-4563
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