Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26866.1 | KRN27391.1 | IV36_GL001498 | IV36_GL001000 | Xaa-Pro aminopeptidase. | Aminopeptidase N. | 0.578 |
KRN26866.1 | KRN34212.1 | IV36_GL001498 | IV36_GL000006 | Xaa-Pro aminopeptidase. | Xaa-His dipeptidase. | 0.567 |
KRN26866.1 | pepT | IV36_GL001498 | IV36_GL002143 | Xaa-Pro aminopeptidase. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.682 |
KRN27391.1 | KRN26866.1 | IV36_GL001000 | IV36_GL001498 | Aminopeptidase N. | Xaa-Pro aminopeptidase. | 0.578 |
KRN27391.1 | KRN30387.1 | IV36_GL001000 | IV36_GL002144 | Aminopeptidase N. | Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | 0.444 |
KRN27391.1 | KRN30390.1 | IV36_GL001000 | IV36_GL002147 | Aminopeptidase N. | Cystathionine beta-lyase cystathionine gamma-synthase. | 0.727 |
KRN27391.1 | KRN30391.1 | IV36_GL001000 | IV36_GL002148 | Aminopeptidase N. | Cysteine synthase. | 0.908 |
KRN27391.1 | KRN30460.1 | IV36_GL001000 | IV36_GL002219 | Aminopeptidase N. | Xaa-Pro dipeptidase; Belongs to the peptidase M24B family. | 0.670 |
KRN27391.1 | KRN34212.1 | IV36_GL001000 | IV36_GL000006 | Aminopeptidase N. | Xaa-His dipeptidase. | 0.954 |
KRN27391.1 | glyA | IV36_GL001000 | IV36_GL000365 | Aminopeptidase N. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.927 |
KRN27391.1 | pepT | IV36_GL001000 | IV36_GL002143 | Aminopeptidase N. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.661 |
KRN30387.1 | KRN27391.1 | IV36_GL002144 | IV36_GL001000 | Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Aminopeptidase N. | 0.444 |
KRN30387.1 | KRN30388.1 | IV36_GL002144 | IV36_GL002145 | Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Hypothetical protein. | 0.996 |
KRN30387.1 | KRN30391.1 | IV36_GL002144 | IV36_GL002148 | Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Cysteine synthase. | 0.445 |
KRN30387.1 | clpB | IV36_GL002144 | IV36_GL002142 | Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.471 |
KRN30387.1 | pepT | IV36_GL002144 | IV36_GL002143 | Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.864 |
KRN30388.1 | KRN30387.1 | IV36_GL002145 | IV36_GL002144 | Hypothetical protein. | Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | 0.996 |
KRN30388.1 | clpB | IV36_GL002145 | IV36_GL002142 | Hypothetical protein. | Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.506 |
KRN30388.1 | pepT | IV36_GL002145 | IV36_GL002143 | Hypothetical protein. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.793 |
KRN30390.1 | KRN27391.1 | IV36_GL002147 | IV36_GL001000 | Cystathionine beta-lyase cystathionine gamma-synthase. | Aminopeptidase N. | 0.727 |
page 1 of 3