Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26711.1 | KRN34309.1 | IV36_GL001579 | IV36_GL000108 | Dihydrodipicolinate synthase. | Aspartate kinase I; Belongs to the aspartokinase family. | 0.726 |
KRN26711.1 | asd | IV36_GL001579 | IV36_GL000159 | Dihydrodipicolinate synthase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.861 |
KRN26711.1 | dapB | IV36_GL001579 | IV36_GL002339 | Dihydrodipicolinate synthase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.955 |
KRN26711.1 | dapF | IV36_GL001579 | IV36_GL000126 | Dihydrodipicolinate synthase. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.810 |
KRN26711.1 | dapH | IV36_GL001579 | IV36_GL000493 | Dihydrodipicolinate synthase. | Tetrahydrodipicolinate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.593 |
KRN26711.1 | lysA | IV36_GL001579 | IV36_GL000908 | Dihydrodipicolinate synthase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.782 |
KRN27372.1 | KRN34309.1 | IV36_GL000981 | IV36_GL000108 | Hypothetical protein. | Aspartate kinase I; Belongs to the aspartokinase family. | 0.714 |
KRN27372.1 | asd | IV36_GL000981 | IV36_GL000159 | Hypothetical protein. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.916 |
KRN27372.1 | dapB | IV36_GL000981 | IV36_GL002339 | Hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.954 |
KRN27372.1 | dapF | IV36_GL000981 | IV36_GL000126 | Hypothetical protein. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.597 |
KRN27372.1 | dapH | IV36_GL000981 | IV36_GL000493 | Hypothetical protein. | Tetrahydrodipicolinate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.606 |
KRN27372.1 | lysA | IV36_GL000981 | IV36_GL000908 | Hypothetical protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.609 |
KRN34309.1 | KRN26711.1 | IV36_GL000108 | IV36_GL001579 | Aspartate kinase I; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase. | 0.726 |
KRN34309.1 | KRN27372.1 | IV36_GL000108 | IV36_GL000981 | Aspartate kinase I; Belongs to the aspartokinase family. | Hypothetical protein. | 0.714 |
KRN34309.1 | asd | IV36_GL000108 | IV36_GL000159 | Aspartate kinase I; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.996 |
KRN34309.1 | birA | IV36_GL000108 | IV36_GL001128 | Aspartate kinase I; Belongs to the aspartokinase family. | Biotin operon repressor biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.491 |
KRN34309.1 | dapA | IV36_GL000108 | IV36_GL000160 | Aspartate kinase I; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.874 |
KRN34309.1 | dapB | IV36_GL000108 | IV36_GL002339 | Aspartate kinase I; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.920 |
KRN34309.1 | dapF | IV36_GL000108 | IV36_GL000126 | Aspartate kinase I; Belongs to the aspartokinase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.903 |
KRN34309.1 | dapH | IV36_GL000108 | IV36_GL000493 | Aspartate kinase I; Belongs to the aspartokinase family. | Tetrahydrodipicolinate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.589 |
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