Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN26561.1 | KRN27242.1 | IV36_GL001830 | IV36_GL001064 | Sugar-specific permease. | PTS family porter. | 0.998 |
KRN26561.1 | KRN29922.1 | IV36_GL001830 | IV36_GL000337 | Sugar-specific permease. | Beta-glucosides PTS, EIIBCA. | 0.998 |
KRN26561.1 | KRN30121.1 | IV36_GL001830 | IV36_GL002373 | Sugar-specific permease. | Transcriptional regulator. | 0.862 |
KRN26561.1 | KRN32052.1 | IV36_GL001830 | IV36_GL001303 | Sugar-specific permease. | PTS system, trehalose-specific IIBC component. | 0.998 |
KRN26561.1 | KRN32053.1 | IV36_GL001830 | IV36_GL001304 | Sugar-specific permease. | Trehalose PTS II ABC. | 0.998 |
KRN26796.1 | KRN30121.1 | IV36_GL001512 | IV36_GL002373 | Cro CI family transcriptional regulator. | Transcriptional regulator. | 0.781 |
KRN26796.1 | KRN33139.1 | IV36_GL001512 | IV36_GL000873 | Cro CI family transcriptional regulator. | Hypothetical protein. | 0.766 |
KRN26796.1 | KRN33140.1 | IV36_GL001512 | IV36_GL000874 | Cro CI family transcriptional regulator. | Hypothetical protein. | 0.767 |
KRN26796.1 | KRN33141.1 | IV36_GL001512 | IV36_GL000875 | Cro CI family transcriptional regulator. | Hypothetical protein. | 0.773 |
KRN26796.1 | KRN34339.1 | IV36_GL001512 | IV36_GL000139 | Cro CI family transcriptional regulator. | Hypothetical protein. | 0.684 |
KRN27242.1 | KRN26561.1 | IV36_GL001064 | IV36_GL001830 | PTS family porter. | Sugar-specific permease. | 0.998 |
KRN27242.1 | KRN29922.1 | IV36_GL001064 | IV36_GL000337 | PTS family porter. | Beta-glucosides PTS, EIIBCA. | 0.998 |
KRN27242.1 | KRN30121.1 | IV36_GL001064 | IV36_GL002373 | PTS family porter. | Transcriptional regulator. | 0.862 |
KRN27242.1 | KRN32052.1 | IV36_GL001064 | IV36_GL001303 | PTS family porter. | PTS system, trehalose-specific IIBC component. | 0.998 |
KRN27242.1 | KRN32053.1 | IV36_GL001064 | IV36_GL001304 | PTS family porter. | Trehalose PTS II ABC. | 0.998 |
KRN29922.1 | KRN26561.1 | IV36_GL000337 | IV36_GL001830 | Beta-glucosides PTS, EIIBCA. | Sugar-specific permease. | 0.998 |
KRN29922.1 | KRN27242.1 | IV36_GL000337 | IV36_GL001064 | Beta-glucosides PTS, EIIBCA. | PTS family porter. | 0.998 |
KRN29922.1 | KRN30121.1 | IV36_GL000337 | IV36_GL002373 | Beta-glucosides PTS, EIIBCA. | Transcriptional regulator. | 0.862 |
KRN29922.1 | KRN32052.1 | IV36_GL000337 | IV36_GL001303 | Beta-glucosides PTS, EIIBCA. | PTS system, trehalose-specific IIBC component. | 0.998 |
KRN29922.1 | KRN32053.1 | IV36_GL000337 | IV36_GL001304 | Beta-glucosides PTS, EIIBCA. | Trehalose PTS II ABC. | 0.998 |
page 1 of 3