STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK66178.1Autotransporter secretion outer membrane protein TamA; PFAM: Surface antigen variable number repeat; Surface antigen. (604 aa)    
Predicted Functional Partners:
KMK66177.1
Hypothetical protein; PFAM: Family of unknown function (DUF490).
 
 
 0.999
KMK66176.1
Threonine dehydratase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: diaminopropionate ammonia-lyase family.
       0.544
KMK66174.1
Maleate cis-trans isomerase; PFAM: Asp/Glu/Hydantoin racemase.
       0.529
KMK66175.1
Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
       0.529
KMK66179.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: AMP-binding enzyme; AMP-binding enzyme C-terminal domain.
       0.444
KMK66180.1
PFAM: Malonyl-CoA decarboxylase (MCD).
       0.436
KMK66181.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
       0.436
KMK66182.1
TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.
       0.436
KMK65440.1
Ykud domain-containing protein; PFAM: L,D-transpeptidase catalytic domain.
  
   
 0.432
KMK64261.1
Ykud domain-containing protein; PFAM: L,D-transpeptidase catalytic domain.
  
   
 0.432
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.