STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK66231.1Sugar phosphate isomerase/epimerase; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel. (352 aa)    
Predicted Functional Partners:
KMK66232.1
Putative dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
 
 0.972
KMK66235.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: Periplasmic binding protein domain.
 
     0.864
KMK66234.1
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
    0.828
KMK66233.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter.
       0.781
KMK68998.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the TPP enzyme family.
  
 
 0.759
KMK68997.1
5-dehydro-2-deoxygluconokinase; PFAM: Uncharacterized protein conserved in bacteria (DUF2090); pfkB family carbohydrate kinase.
  
 
 0.732
KMK66230.1
PFAM: Bacterial regulatory proteins, lacI family; Periplasmic binding protein-like domain.
 
    0.676
KMK69001.1
5-deoxyglucuronate isomerase; PFAM: KduI/IolB family.
  
  
 0.660
KMK68996.1
Putative dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
 
 0.614
KMK64834.1
Putative dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
 
 0.594
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.