STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK66328.1TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component. (207 aa)    
Predicted Functional Partners:
KMK66329.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
     0.929
KMK66330.1
TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein, family 7.
 
     0.924
KMK66539.1
TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein, family 7.
  
     0.774
KMK64903.1
PFAM: Protein of unknown function (DUF2848).
 
    0.725
KMK66327.1
N-methylhydantoinase B/acetone carboxylase, alpha subunit; PFAM: Hydantoinase B/oxoprolinase.
       0.657
KMK66326.1
N-methylhydantoinase A/acetone carboxylase, beta subunit; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region.
       0.653
KMK64878.1
PFAM: Protein of unknown function (DUF1445); Belongs to the D-glutamate cyclase family.
 
     0.634
KMK67763.1
TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein, family 7.
  
     0.402
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.