STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK66349.1Putative permease; PFAM: Sulfite exporter TauE/SafE. (251 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
       0.681
KMK66903.1
PFAM: Putative peptidoglycan binding domain; Trypsin-like peptidase domain.
  
 
 
 0.544
rbsK
Sugar kinase, ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
     0.533
KMK67448.1
PFAM: Trypsin-like peptidase domain; PDZ domain; TIGRFAM: periplasmic serine protease, Do/DeqQ family; Belongs to the peptidase S1C family.
    
 
 0.438
KMK67981.1
PFAM: Trypsin-like peptidase domain; PDZ domain; TIGRFAM: periplasmic serine protease, Do/DeqQ family; Belongs to the peptidase S1C family.
    
 
 0.438
KMK68236.1
PFAM: Trypsin-like peptidase domain; PDZ domain; TIGRFAM: periplasmic serine protease, Do/DeqQ family.
    
 
 0.438
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.