STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK66421.1PFAM: FAD binding domain; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase. (389 aa)    
Predicted Functional Partners:
KMK66425.1
PFAM: Protocatechuate 3,4-dioxygenase beta subunit N terminal; Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit.
  
 0.988
KMK66426.1
PFAM: Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit.
 
  
 0.988
KMK66424.1
PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: 4-carboxymuconolactone decarboxylase.
 
   
 0.916
KMK66422.1
DNA-binding domain-containing protein, AraC-type; PFAM: Helix-turn-helix domain; AraC-like ligand binding domain.
 
   
 0.901
KMK66171.1
PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
 
  
 0.898
KMK66172.1
PFAM: Aromatic-ring-opening dioxygenase LigAB, LigA subunit; TIGRFAM: protocatechuate 4,5-dioxygenase, alpha subunit.
  
 
 0.889
KMK67920.1
acyl-CoA synthetase/AMP-acid ligase; PFAM: AMP-binding enzyme; AMP-binding enzyme C-terminal domain.
   
 
 0.830
KMK68121.1
3-oxoadipate enol-lactonase; PFAM: Alpha/beta hydrolase family; TIGRFAM: 3-oxoadipate enol-lactonase.
 
 
 0.764
KMK68021.1
PFAM: Cytochrome P450.
  
 0.726
KMK66289.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: HxxPF-repeated domain; Acyl transferase domain; Aminotransferase class-III; Condensation domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme C-terminal domain; TIGRFAM: amino acid adenylation domain.
  
 0.722
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.