STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK65335.1PFAM: Pterin 4 alpha carbinolamine dehydratase. (96 aa)    
Predicted Functional Partners:
KMK68442.1
PFAM: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.871
KMK65334.1
PFAM: Protein of unknown function, DUF482.
  
    0.856
KMK68002.1
PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase.
 
  
 0.791
KMK65333.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
   
   0.788
KMK65332.1
Putative translation initiation inhibitor, yjgF family; PFAM: YjgF/chorismate_mutase-like, putative endoribonuclease.
  
    0.730
KMK66392.1
Aromatic amino acid aminotransferase apoenzyme; PFAM: Aminotransferase class I and II.
  
  
 0.720
KMK65330.1
PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: type I secretion system ABC transporter, PrtD family.
       0.625
KMK65606.1
PFAM: Protein of unknown function DUF58.
   
    0.621
KMK65056.1
PFAM: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal; Xylose isomerase-like TIM barrel; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.519
KMK65331.1
PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family.
       0.517
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.