STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK67119.1Lytic murein transglycosylase; PFAM: Transglycosylase SLT domain; Putative peptidoglycan binding domain; TIGRFAM: lytic murein transglycosylase. (414 aa)    
Predicted Functional Partners:
KMK67117.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family; YceI-like domain; Belongs to the UPF0312 family.
     
 0.502
KMK67118.1
Hypothetical protein; PFAM: Caspase domain.
       0.499
KMK66061.1
Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.
   
 
 0.481
KMK67432.1
PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
  
  
  0.450
secB
Protein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.436
KMK66666.1
Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain.
   
 
 0.429
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.