STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK67596.1PFAM: Aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family. (193 aa)    
Predicted Functional Partners:
KMK67595.1
PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family.
       0.724
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
       0.471
KMK67715.1
PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
  
    0.470
KMK67594.1
ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter.
       0.424
KMK65696.1
PFAM: Protein of unknown function (DUF2794).
  
     0.415
KMK66107.1
ATP phosphoribosyltransferase involved in histidine biosynthesis; PFAM: Histidyl-tRNA synthetase.
  
     0.404
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.