STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK67702.1TIGRFAM: putative phage cell wall peptidase, NlpC/P60 family. (143 aa)    
Predicted Functional Partners:
KMK67705.1
TIGRFAM: phage tail tape measure protein, lambda family.
 
  
 0.959
KMK67703.1
PFAM: Phage conserved hypothetical protein BR0599; Uncharacterized conserved protein (DUF2163); TIGRFAM: phage conserved hypothetical protein BR0599.
 
     0.952
KMK67704.1
TIGR02217 family protein; PFAM: Conserved hypothetical protein 2217 (DUF2460); TIGRFAM: TIGR02217 family protein.
 
     0.952
KMK67707.1
PFAM: Protein of unknown function (DUF3356).
 
    0.951
KMK67708.1
PFAM: Phage major tail protein 2; TIGRFAM: phage major tail protein, TP901-1 family.
 
     0.951
KMK67701.1
PFAM: Putative phage tail protein; GTA TIM-barrel-like domain.
 
     0.949
KMK67709.1
PFAM: Protein of unknown function (DUF3168).
 
     0.934
KMK67711.1
Hypothetical protein; PFAM: Phage gp6-like head-tail connector protein; TIGRFAM: phage conserved hypothetical protein, phiE125 gp8 family.
 
     0.933
KMK67710.1
Bacteriophage head-tail adaptor; PFAM: Phage head-tail joining protein.
 
     0.927
KMK67706.1
PFAM: Conserved hypothetical phage protein (DUF2376); TIGRFAM: phage conserved hypothetical protein.
 
     0.911
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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