STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK67951.1Putative Fe-S protein; PFAM: Protein of unknown function (DUF1289). (78 aa)    
Predicted Functional Partners:
KMK67950.1
RNAse H-fold protein YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.780
KMK67949.1
TIGRFAM: cytochrome c-type biogenesis protein CcmI.
 
   
 0.766
KMK67494.1
Hypothetical protein.
  
     0.742
KMK65793.1
Putative secreted protein; PFAM: Protein of unknown function (DUF1467).
  
     0.689
KMK68933.1
PFAM: Helix-turn-helix.
  
     0.570
KMK66514.1
Hypothetical protein.
  
     0.485
KMK67675.1
Exopolyphosphatase; PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase.
  
     0.413
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.