STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK67952.1Putative permease; PFAM: Sulfite exporter TauE/SafE. (274 aa)    
Predicted Functional Partners:
dusA
tRNA-U16,U17-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.
       0.642
KMK66903.1
PFAM: Putative peptidoglycan binding domain; Trypsin-like peptidase domain.
    
 
 0.438
KMK67448.1
PFAM: Trypsin-like peptidase domain; PDZ domain; TIGRFAM: periplasmic serine protease, Do/DeqQ family; Belongs to the peptidase S1C family.
    
 
 0.438
KMK67981.1
PFAM: Trypsin-like peptidase domain; PDZ domain; TIGRFAM: periplasmic serine protease, Do/DeqQ family; Belongs to the peptidase S1C family.
    
 
 0.438
KMK68236.1
PFAM: Trypsin-like peptidase domain; PDZ domain; TIGRFAM: periplasmic serine protease, Do/DeqQ family.
    
 
 0.438
KMK66649.1
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase.
  
    0.410
KMK67004.1
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase.
  
    0.410
KMK65912.1
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase.
  
    0.410
KMK66040.1
Alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase.
  
    0.410
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.