STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK68054.1Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family. (305 aa)    
Predicted Functional Partners:
KMK68055.1
Hypothetical protein.
       0.773
KMK66935.1
PFAM: Phage integrase family.
  
     0.667
KMK65510.1
Hypothetical protein.
  
     0.594
KMK68053.1
PFAM: Transposase.
       0.584
KMK63998.1
Hypothetical protein.
  
     0.579
KMK64036.1
Topoisomerase-like C4 zinc finger-containing protein; PFAM: UvrD-like helicase C-terminal domain; Topoisomerase DNA binding C4 zinc finger; UvrD/REP helicase N-terminal domain.
 
  
 0.577
KMK63813.1
Hypothetical protein.
  
     0.563
KMK63778.1
Hypothetical protein.
  
     0.560
KMK68052.1
Transposase; PFAM: Integrase core domain.
       0.536
KMK63996.1
Hypothetical protein.
  
     0.529
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.