STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK65546.1PFAM: Bacterial regulatory proteins, gntR family; FCD domain. (220 aa)    
Predicted Functional Partners:
KMK67095.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.772
KMK67363.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.772
KMK67747.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.771
KMK68642.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.765
KMK66286.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
     0.685
KMK68942.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
    0.671
KMK63873.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
    0.655
KMK68266.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
    0.550
KMK68970.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
    0.516
trmD
tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
       0.493
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.