STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK69038.1TRAP transporter solute receptor, TAXI family; PFAM: ABC transporter, phosphonate, periplasmic substrate-binding protein; TIGRFAM: TRAP transporter solute receptor, TAXI family. (319 aa)    
Predicted Functional Partners:
KMK69037.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.918
KMK69036.1
PFAM: Domain of unknown function (DUF1850).
 
    0.894
KMK68490.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.817
KMK68860.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.815
KMK65121.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.813
KMK64937.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.812
KMK64850.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.811
KMK64088.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.811
KMK65126.1
PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.810
KMK69041.1
TRAP transporter, 4TM/12TM fusion protein; PFAM: Domain of unknown function (DUF3394); DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein.
    0.803
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.