STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK65694.1Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family. (279 aa)    
Predicted Functional Partners:
KMK65693.1
PFAM: Cytosol aminopeptidase family, catalytic domain; Belongs to the peptidase M17 family.
       0.808
KMK65695.1
Agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family.
       0.773
KMK68851.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
   0.766
KMK65692.1
Hypothetical protein.
       0.706
KMK65696.1
PFAM: Protein of unknown function (DUF2794).
  
     0.696
KMK65574.1
PFAM: Hemimethylated DNA-binding protein YccV like; TIGRFAM: hemimethylated DNA binding domain.
  
     0.663
KMK68542.1
Hypothetical protein; PFAM: GcrA cell cycle regulator.
  
     0.646
KMK67374.1
Iron-sulfur cluster biosynthesis protein, NifU-like protein.
  
   
 0.592
KMK65691.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.568
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.564
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.