STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK64832.1PFAM: Transposase. (124 aa)    
Predicted Functional Partners:
KMK64831.1
Transposase; PFAM: Integrase core domain; Winged helix-turn helix.
    0.940
KMK65953.1
PFAM: Helix-turn-helix domain.
  
    0.769
KMK68067.1
Integrase family protein; PFAM: Integrase core domain.
 
    0.762
KMK67822.1
PFAM: Integrase core domain.
 
    0.751
KMK67828.1
Transposase; PFAM: Integrase core domain; Winged helix-turn helix.
 
    0.748
KMK68065.1
Transposase; PFAM: Integrase core domain; Winged helix-turn helix.
 
    0.748
KMK68201.1
Transposase; PFAM: Integrase core domain; Winged helix-turn helix.
 
    0.748
KMK69034.1
Transposase; PFAM: Integrase core domain; Winged helix-turn helix.
 
    0.748
KMK65785.1
Transposase; PFAM: Integrase core domain; Winged helix-turn helix.
 
    0.748
KMK68185.1
Transposase; PFAM: Integrase core domain; Winged helix-turn helix.
 
    0.746
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.