STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK64624.1PFAM: Bacterial TniB protein. (288 aa)    
Predicted Functional Partners:
KMK64625.1
PFAM: Mu transposase, C-terminal; Integrase core domain.
   
 0.950
KMK64623.1
PFAM: TniQ.
 
   
 0.948
KMK64049.1
PFAM: Mu transposase, C-terminal; Integrase core domain.
   
 0.819
KMK64047.1
PFAM: TniQ.
 
   
 0.783
KMK64626.1
PFAM: HTH DNA binding domain.
       0.510
KMK65558.1
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgB; Belongs to the flagella basal body rod proteins family.
    
   0.505
KMK63859.1
Putative transcriptional regulator; PFAM: ParB-like nuclease domain; TIGRFAM: ParB/RepB/Spo0J family partition protein.
  
    0.479
KMK64620.1
Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.463
KMK64212.1
Site-specific recombinase XerD; PFAM: Phage integrase family.
  
     0.463
KMK64044.1
Site-specific recombinase XerD; PFAM: Phage integrase family.
  
     0.463
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.