STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK63920.1PFAM: Helix-turn-helix domain; TIGRFAM: DNA binding domain, excisionase family. (154 aa)    
Predicted Functional Partners:
KMK63919.1
PFAM: PIN domain.
 
  
 0.949
KMK66405.1
Glutamate synthase (NADPH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
    
  0.799
KMK66923.1
PFAM: PIN domain.
 
  
 0.784
KMK64697.1
PFAM: PIN domain.
 
  
 0.784
KMK64505.1
PFAM: PIN domain.
 
  
 0.784
KMK66313.1
Malic enzyme; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
     
 0.613
KMK65422.1
Malic enzyme; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
     
 0.613
KMK63921.1
Putative transcriptional regulator containing the HTH domain; PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B.
       0.492
KMK63922.1
PFAM: Protein of unknown function (DUF1403).
       0.492
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.