STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK63923.1Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family. (365 aa)    
Predicted Functional Partners:
KMK63921.1
Putative transcriptional regulator containing the HTH domain; PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B.
 
     0.865
KMK64622.1
Putative transcriptional regulator containing the HTH domain; PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B.
  
     0.724
KMK64046.1
Putative transcriptional regulator containing the HTH domain; PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B.
  
     0.724
KMK64214.1
PFAM: Putative transcriptional regulators (Ypuh-like).
  
     0.619
KMK63926.1
PFAM: Replication protein C C-terminal region; Replication protein C N-terminal domain.
  
     0.560
KMK63922.1
PFAM: Protein of unknown function (DUF1403).
       0.532
KMK64625.1
PFAM: Mu transposase, C-terminal; Integrase core domain.
  
     0.447
KMK64049.1
PFAM: Mu transposase, C-terminal; Integrase core domain.
  
     0.447
KMK64216.1
PFAM: Bacterial TniB protein; IMG reference gene:2609501496_SP.
  
     0.446
KMK64624.1
PFAM: Bacterial TniB protein.
  
     0.435
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.