STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMK63817.1PFAM: Bacterial sugar transferase; possibly involved in lipopolysaccharide synthesis. (225 aa)    
Predicted Functional Partners:
KMK63959.1
Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-6-phosphate isomerase, type 2.
  
 
 0.967
KMK63835.1
PFAM: AAA domain; Chain length determinant protein; G-rich domain on putative tyrosine kinase; TIGRFAM: capsular exopolysaccharide family.
 
 
 0.956
KMK63814.1
ATPase involved in chromosome partitioning; PFAM: AAA domain.
 
 
 0.820
KMK65688.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: CoA-binding domain; Polysaccharide biosynthesis protein.
 
 0.779
KMK65646.1
ATPase involved in chromosome partitioning; PFAM: AAA domain.
 
 
 0.766
KMK63819.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
 
 0.766
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.670
KMK63826.1
PFAM: Glycosyl transferase family 2.
 
 
 0.619
KMK63833.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-antigen ligase like membrane protein.
  
  
 0.616
KMK63967.1
PFAM: Glycosyl transferase family 2.
 
  
 0.600
Your Current Organism:
Puniceibacterium sp. IMCC21224
NCBI taxonomy Id: 1618204
Other names: P. sp. IMCC21224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.