STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJT41475.1Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)    
Predicted Functional Partners:
AJT41473.1
Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.800
AJT41472.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.709
AJT41474.1
Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.697
AJT42302.1
Sugar ABC transporter sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.636
AJT42975.1
endo-alpha-N-acetylgalactosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.630
glmS
Glutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
  
0.498
AJT40809.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
    0.481
AJT41339.1
N-acetylglucosamine 6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.459
AJT43153.1
Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.452
AJT42304.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.428
Your Current Organism:
Psychromicrobium lacuslunae
NCBI taxonomy Id: 1618207
Other names: Arthrobacter sp. IHBB 11108, JCM 31143, KACC 19070, MCC 2780, MTCC 12460, P. lacuslunae, strain IHBB 11108
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