Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KKW05529.1 | rho | UY40_C0016G0009 | UY40_C0007G0030 | 60 kDa inner membrane insertion protein, preprotein translocase subunit YidC. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.715 |
| KKW05778.1 | KKW05886.1 | UY40_C0008G0005 | UY40_C0007G0025 | Trigger factor. | 30S ribosomal protein S1. | 0.884 |
| KKW05778.1 | nusA | UY40_C0008G0005 | UY40_C0004G0010 | Trigger factor. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.646 |
| KKW05778.1 | nusG | UY40_C0008G0005 | UY40_C0026G0002 | Trigger factor. | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. | 0.471 |
| KKW05778.1 | pnp | UY40_C0008G0005 | UY40_C0004G0007 | Trigger factor. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.528 |
| KKW05778.1 | rho | UY40_C0008G0005 | UY40_C0007G0030 | Trigger factor. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.638 |
| KKW05778.1 | rpoA | UY40_C0008G0005 | UY40_C0005G0061 | Trigger factor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.789 |
| KKW05778.1 | rpoB | UY40_C0008G0005 | UY40_C0005G0017 | Trigger factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.540 |
| KKW05886.1 | KKW05778.1 | UY40_C0007G0025 | UY40_C0008G0005 | 30S ribosomal protein S1. | Trigger factor. | 0.884 |
| KKW05886.1 | KKW05960.1 | UY40_C0007G0025 | UY40_C0005G0018 | 30S ribosomal protein S1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.883 |
| KKW05886.1 | KKW05961.1 | UY40_C0007G0025 | UY40_C0005G0019 | 30S ribosomal protein S1. | DNA-directed RNA polymerase. | 0.883 |
| KKW05886.1 | nusA | UY40_C0007G0025 | UY40_C0004G0010 | 30S ribosomal protein S1. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.792 |
| KKW05886.1 | nusG | UY40_C0007G0025 | UY40_C0026G0002 | 30S ribosomal protein S1. | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. | 0.751 |
| KKW05886.1 | pnp | UY40_C0007G0025 | UY40_C0004G0007 | 30S ribosomal protein S1. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.538 |
| KKW05886.1 | rho | UY40_C0007G0025 | UY40_C0007G0030 | 30S ribosomal protein S1. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.552 |
| KKW05886.1 | rpoA | UY40_C0007G0025 | UY40_C0005G0061 | 30S ribosomal protein S1. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.918 |
| KKW05886.1 | rpoB | UY40_C0007G0025 | UY40_C0005G0017 | 30S ribosomal protein S1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.948 |
| KKW05960.1 | KKW05886.1 | UY40_C0005G0018 | UY40_C0007G0025 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 30S ribosomal protein S1. | 0.883 |
| KKW05960.1 | KKW05961.1 | UY40_C0005G0018 | UY40_C0005G0019 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase. | 0.994 |
| KKW05960.1 | nusA | UY40_C0005G0018 | UY40_C0004G0010 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.946 |
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