STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW05586.1Bis(5'-nucleosyl)-tetraphosphatase (Asymmetrical). (127 aa)    
Predicted Functional Partners:
KKW05584.1
Hypothetical protein.
     
 0.790
KKW05585.1
Histidine triad domain protein, Hit-like protein involved in cell-cycle regulation.
       0.773
KKW05492.1
Hypothetical protein.
  
 0.674
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.631
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.622
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
    0.618
KKW05457.1
ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family.
  
 
  0.618
KKW05588.1
Hypothetical protein.
       0.591
KKW05960.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.586
KKW05961.1
DNA-directed RNA polymerase.
    
  0.586
Your Current Organism:
candidate division CPR1
NCBI taxonomy Id: 1618342
Other names: c. division CPR1 bacterium GW2011_GWC1_49_13, candidate division CPR1 bacterium GW2011_GWC1_49_13
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