STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ95169.1Type 4 prepilin-like protein leader peptide-processing enzyme. (277 aa)    
Predicted Functional Partners:
KKQ95172.1
Twitching motility protein.
 
   
 0.821
KKQ95171.1
Type II secretion system protein.
 
  
 0.710
KKQ95170.1
Hypothetical protein.
 
  
 0.670
KKQ94821.1
Transcriptional regulator, MarR family.
  
  
 0.653
KKQ95167.1
Hypothetical protein.
       0.588
KKQ95168.1
Hypothetical protein.
       0.588
KKQ95156.1
Two-component hybrid sensor and regulator.
   
 
 0.555
KKQ94458.1
Glycosyltransferase.
     
 0.537
KKQ95174.1
Type II secretion system protein E.
  
 
 0.516
KKQ95173.1
S23 ribosomal protein.
  
  
 0.480
Your Current Organism:
candidate division CPR2 bacterium GW2011GWC23910
NCBI taxonomy Id: 1618345
Other names: c. division CPR2 bacterium GW2011_GWC2_39_10, candidate division CPR2 bacterium GW2011_GWC2_39_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.