STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ93979.1D-beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (230 aa)    
Predicted Functional Partners:
KKQ93975.1
Nitroreductase.
  
 
 0.922
KKQ94856.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
0.863
KKQ95442.1
Hypothetical protein.
    
 0.805
KKQ93739.1
Major facilitator superfamily.
  
 
 0.805
KKQ93229.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.793
KKQ94904.1
Hypothetical protein.
    
  0.768
KKQ93977.1
Inositol-1-monophosphatase.
       0.753
KKQ95078.1
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate). Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
  0.751
KKQ93978.1
Hypothetical protein.
       0.746
KKQ93230.1
3-oxoacyl-(Acyl carrier protein) synthase III.
    
  0.743
Your Current Organism:
candidate division CPR2 bacterium GW2011GWC23910
NCBI taxonomy Id: 1618345
Other names: c. division CPR2 bacterium GW2011_GWC2_39_10, candidate division CPR2 bacterium GW2011_GWC2_39_10
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