STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ93140.1Ham1 family protein. (156 aa)    
Predicted Functional Partners:
KKQ93954.1
Leucine-tRNA ligase.
  
 
 0.871
KKQ93549.1
Nucleoside diphosphate kinase.
  
 
 0.840
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
   
 
 0.832
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
 
  0.807
KKQ95294.1
Ribonucleoside-diphosphate reductase.
   
 
  0.798
KKQ95061.1
Cell wall hydrolase.
    
  0.778
KKQ93139.1
Hypothetical protein.
       0.773
KKQ93282.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.764
KKQ93222.1
TPR Domain containing protein.
  
 
  0.760
KKQ94919.1
Bifunctional phosphoribosylaminoimidazolecarboxa mide formyltransferase/IMP cyclohydrolase.
     
 0.759
Your Current Organism:
candidate division CPR2 bacterium GW2011GWC23910
NCBI taxonomy Id: 1618345
Other names: c. division CPR2 bacterium GW2011_GWC2_39_10, candidate division CPR2 bacterium GW2011_GWC2_39_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.