Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KKP69617.1 | KKP69618.1 | UR67_C0004G0014 | UR67_C0004G0015 | (P)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Single-stranded-DNA-specific exonuclease recJ. | 0.611 |
| KKP69617.1 | recG | UR67_C0004G0014 | UR67_C0002G0093 | (P)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Helicase protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.534 |
| KKP69617.1 | rpmF | UR67_C0004G0014 | UR67_C0002G0091 | (P)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.999 |
| KKP69618.1 | KKP69617.1 | UR67_C0004G0015 | UR67_C0004G0014 | Single-stranded-DNA-specific exonuclease recJ. | (P)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.611 |
| KKP69618.1 | KKP69838.1 | UR67_C0004G0015 | UR67_C0003G0118 | Single-stranded-DNA-specific exonuclease recJ. | Single-stranded DNA-binding protein. | 0.665 |
| KKP69618.1 | KKP69972.1 | UR67_C0004G0015 | UR67_C0002G0092 | Single-stranded-DNA-specific exonuclease recJ. | Methyltransferase. | 0.621 |
| KKP69618.1 | KKP70257.1 | UR67_C0004G0015 | UR67_C0001G0166 | Single-stranded-DNA-specific exonuclease recJ. | Hypothetical protein. | 0.593 |
| KKP69618.1 | recG | UR67_C0004G0015 | UR67_C0002G0093 | Single-stranded-DNA-specific exonuclease recJ. | Helicase protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.478 |
| KKP69766.1 | recG | UR67_C0003G0044 | UR67_C0002G0093 | RNP-1 like protein RNA-binding protein, Glycine-rich. | Helicase protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.715 |
| KKP69838.1 | KKP69618.1 | UR67_C0003G0118 | UR67_C0004G0015 | Single-stranded DNA-binding protein. | Single-stranded-DNA-specific exonuclease recJ. | 0.665 |
| KKP69838.1 | KKP70257.1 | UR67_C0003G0118 | UR67_C0001G0166 | Single-stranded DNA-binding protein. | Hypothetical protein. | 0.910 |
| KKP69838.1 | recG | UR67_C0003G0118 | UR67_C0002G0093 | Single-stranded DNA-binding protein. | Helicase protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.548 |
| KKP69972.1 | KKP69618.1 | UR67_C0002G0092 | UR67_C0004G0015 | Methyltransferase. | Single-stranded-DNA-specific exonuclease recJ. | 0.621 |
| KKP69972.1 | KKP69975.1 | UR67_C0002G0092 | UR67_C0002G0095 | Methyltransferase. | Tyrosine-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.490 |
| KKP69972.1 | nusB | UR67_C0002G0092 | UR67_C0002G0090 | Methyltransferase. | N utilization substance protein B-like protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.512 |
| KKP69972.1 | recG | UR67_C0002G0092 | UR67_C0002G0093 | Methyltransferase. | Helicase protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.735 |
| KKP69972.1 | rpmF | UR67_C0002G0092 | UR67_C0002G0091 | Methyltransferase. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.595 |
| KKP69975.1 | KKP69972.1 | UR67_C0002G0095 | UR67_C0002G0092 | Tyrosine-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | Methyltransferase. | 0.490 |
| KKP69975.1 | KKP70264.1 | UR67_C0002G0095 | UR67_C0001G0173 | Tyrosine-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | Isoleucyl-tRNA synthetase. | 0.626 |
| KKP69975.1 | nusB | UR67_C0002G0095 | UR67_C0002G0090 | Tyrosine-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. | N utilization substance protein B-like protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.528 |
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