STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKP69271.1Translocase FtsK protein. (764 aa)    
Predicted Functional Partners:
KKP69272.1
Transcriptional regulator, XRE family.
    
 0.945
rnj
RNA-metabolising metallo-beta-lactamase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
 
    0.932
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.805
KKP70268.1
Hypothetical protein.
   
 
 0.793
KKP70260.1
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
  
   
 0.760
KKP69270.1
Hypothetical protein.
       0.757
KKP69273.1
Hypothetical protein.
       0.752
KKP69091.1
ATPase the helicase subunit of the Holliday junction resolvase.
 
    0.676
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
  
 0.643
KKP70038.1
Thermitase.
  
 
 0.610
Your Current Organism:
candidate division CPR3 bacterium GW2011GWF23518
NCBI taxonomy Id: 1618350
Other names: c. division CPR3 bacterium GW2011_GWF2_35_18, candidate division CPR3 bacterium GW2011_GWF2_35_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.