STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS32415.1Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (562 aa)    
Predicted Functional Partners:
leuS
Leucyl-tRNA ligase LeuS; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.985
KKS32399.1
Prolyl-tRNA synthetase.
  
 0.954
KKS32981.1
Methionine-tRNA ligase.
  
 0.945
KKS33212.1
Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.904
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 0.834
KKS32416.1
Competence protein ComEC.
       0.794
KKS32414.1
Peptidase M16 domain protein; Belongs to the peptidase M16 family.
       0.788
KKS32417.1
ComEC/Rec2-related protein.
       0.771
KKS32418.1
Hypothetical protein.
       0.771
pheT
Phenylalanine-tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.710
Your Current Organism:
Amesbacteria bacterium GW2011GWA24212
NCBI taxonomy Id: 1618356
Other names: C. Amesbacteria bacterium GW2011_GWA2_42_12, Candidatus Amesbacteria bacterium GW2011_GWA2_42_12
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