STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS30672.1Pseudouridine synthase. (88 aa)    
Predicted Functional Partners:
KKS33090.1
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
   
 0.866
KKS30673.1
Hypothetical protein.
       0.773
KKS30674.1
Hypothetical protein.
       0.495
pheT
Phenylalanine-tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.483
KKS31867.1
DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family.
  
   0.424
KKS32163.1
NUDIX hydrolase.
   
 
 0.410
Your Current Organism:
Amesbacteria bacterium GW2011GWA24212
NCBI taxonomy Id: 1618356
Other names: C. Amesbacteria bacterium GW2011_GWA2_42_12, Candidatus Amesbacteria bacterium GW2011_GWA2_42_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.