Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKS80309.1 | KKS80310.1 | UV54_C0010G0001 | UV54_C0010G0002 | Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Membrane protein insertase, YidC/Oxa1 family. | 0.439 |
KKS80309.1 | KKS80311.1 | UV54_C0010G0001 | UV54_C0010G0003 | Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Single-stranded nucleic acid binding R3H domain protein. | 0.439 |
KKS80309.1 | KKS80312.1 | UV54_C0010G0001 | UV54_C0010G0004 | Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Hypothetical protein. | 0.439 |
KKS80310.1 | KKS80309.1 | UV54_C0010G0002 | UV54_C0010G0001 | Membrane protein insertase, YidC/Oxa1 family. | Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.439 |
KKS80310.1 | KKS80311.1 | UV54_C0010G0002 | UV54_C0010G0003 | Membrane protein insertase, YidC/Oxa1 family. | Single-stranded nucleic acid binding R3H domain protein. | 0.913 |
KKS80310.1 | KKS80312.1 | UV54_C0010G0002 | UV54_C0010G0004 | Membrane protein insertase, YidC/Oxa1 family. | Hypothetical protein. | 0.856 |
KKS80311.1 | KKS80309.1 | UV54_C0010G0003 | UV54_C0010G0001 | Single-stranded nucleic acid binding R3H domain protein. | Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.439 |
KKS80311.1 | KKS80310.1 | UV54_C0010G0003 | UV54_C0010G0002 | Single-stranded nucleic acid binding R3H domain protein. | Membrane protein insertase, YidC/Oxa1 family. | 0.913 |
KKS80311.1 | KKS80312.1 | UV54_C0010G0003 | UV54_C0010G0004 | Single-stranded nucleic acid binding R3H domain protein. | Hypothetical protein. | 0.818 |
KKS80312.1 | KKS80309.1 | UV54_C0010G0004 | UV54_C0010G0001 | Hypothetical protein. | Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.439 |
KKS80312.1 | KKS80310.1 | UV54_C0010G0004 | UV54_C0010G0002 | Hypothetical protein. | Membrane protein insertase, YidC/Oxa1 family. | 0.856 |
KKS80312.1 | KKS80311.1 | UV54_C0010G0004 | UV54_C0010G0003 | Hypothetical protein. | Single-stranded nucleic acid binding R3H domain protein. | 0.818 |