STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS79942.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
KKS80398.1
Polymerase I protein.
       0.708
KKS79943.1
Hypothetical protein.
       0.655
KKS79940.1
Translation initiation factor IF-2.
       0.568
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
       0.568
KKS79939.1
Exopolyphosphatase family protein.
       0.543
KKS80058.1
Cytochrome c biogenesis protein transmembrane region.
  
    0.487
KKS80061.1
Cation transporting ATPase, E1-E2 family.
     
 0.484
KKS79914.1
Hypothetical protein.
  
   0.458
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.435
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.414
Your Current Organism:
Beckwithbacteria bacterium GW2011GWA24310
NCBI taxonomy Id: 1618369
Other names: C. Beckwithbacteria bacterium GW2011_GWA2_43_10, Candidatus Beckwithbacteria bacterium GW2011_GWA2_43_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.