STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS78885.1Hypothetical protein. (456 aa)    
Predicted Functional Partners:
KKS79618.1
D,D-heptose 1,7-bisphosphate phosphatase.
  
 
 0.888
KKS79619.1
Hypothetical protein.
  
 
 0.871
KKS80313.1
NAD-dependent epimerase/dehydratase.
  
 
 0.797
KKS79400.1
Bifunctional protein HldE.
    
 0.784
xylB
Xylulose kinase.
       0.773
KKS78987.1
Hypothetical protein.
   
 
 0.707
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
   
 
 0.707
KKS78882.1
Signal transduction histidine kinase.
  
    0.581
KKS78883.1
OmpR family response regulator.
       0.558
KKS78881.1
Hypothetical protein.
       0.435
Your Current Organism:
Beckwithbacteria bacterium GW2011GWA24310
NCBI taxonomy Id: 1618369
Other names: C. Beckwithbacteria bacterium GW2011_GWA2_43_10, Candidatus Beckwithbacteria bacterium GW2011_GWA2_43_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.