STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS78835.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
KKS78834.1
Type IV secretory pathway VirB4 subunit.
  
 0.996
KKS78833.1
Type IV secretory pathway VirB4 component-like protein.
  
 0.994
KKS79978.1
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.809
KKS80143.1
ATP-grasp domain protein.
  
  
  0.802
pckA
Atp Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
    
 0.783
KKS79066.1
Nitroreductase.
    
  0.742
KKS80107.1
Alpha/beta hydrolase fold protein.
  
 
 0.669
KKS79897.1
Alpha/beta hydrolase fold protein.
  
 
 0.669
KKS78836.1
Hypothetical protein.
       0.617
KKS78837.1
Hypothetical protein.
       0.519
Your Current Organism:
Beckwithbacteria bacterium GW2011GWA24310
NCBI taxonomy Id: 1618369
Other names: C. Beckwithbacteria bacterium GW2011_GWA2_43_10, Candidatus Beckwithbacteria bacterium GW2011_GWA2_43_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.