STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS78602.1Radical SAM. (185 aa)    
Predicted Functional Partners:
KKS78603.1
Radical SAM domain protein.
      0.976
KKS78600.1
Pyruvate dehydrogenase, E1 component, beta subunit.
       0.744
KKS78601.1
Dehydrogenase E1 component.
       0.744
KKS78604.1
Hypothetical protein.
  
    0.639
KKS79057.1
4-hydroxybenzoate polyprenyltransferase-like protein prenyltransferase; Belongs to the UbiA prenyltransferase family.
  
 
  0.571
KKS80143.1
ATP-grasp domain protein.
    
  0.427
KKS80105.1
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.411
KKS78675.1
Spore coat polysaccharide biosynthesis protein SpsC; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.411
KKS80400.1
ABC transporter, ATPase subunit.
  
 
  0.404
KKS78605.1
Hypothetical protein.
       0.400
Your Current Organism:
Beckwithbacteria bacterium GW2011GWA24310
NCBI taxonomy Id: 1618369
Other names: C. Beckwithbacteria bacterium GW2011_GWA2_43_10, Candidatus Beckwithbacteria bacterium GW2011_GWA2_43_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.