STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT73777.1DNA-binding helix-turn-helix protein. (90 aa)    
Predicted Functional Partners:
KKT73776.1
Hypothetical protein.
  
 
 0.947
KKT73533.1
GTP pyrophosphokinase.
    
  0.637
KKT73201.1
Hypothetical protein.
    
  0.626
KKT73444.1
Hypothetical protein.
    
  0.521
KKT72268.1
Nucleoside diphosphate kinase.
    
  0.487
KKT73775.1
Hypothetical protein.
       0.453
KKT73266.1
Hypothetical protein.
  
 
  0.441
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
    
  0.420
Your Current Organism:
Collierbacteria bacterium GW2011GWB1446
NCBI taxonomy Id: 1618384
Other names: C. Collierbacteria bacterium GW2011_GWB1_44_6, Candidatus Collierbacteria bacterium GW2011_GWB1_44_6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.