STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
KKT72840.1Tyrosine-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr). Belongs to the class-I aminoacyl-tRNA synthetase family. (405 aa)    
Predicted Functional Partners:
KKT72951.1
T-RNA-binding domain protein.
  
 0.943
leuS
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.851
KKT72073.1
Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.828
thrS
Threonine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.805
KKT71695.1
Hypothetical protein.
 
   0.794
argS
Arginine-tRNA ligase.
  
  
 0.767
KKT72133.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.739
KKT73366.1
Phenylalanine-tRNA ligase beta subunit.
  
  
 0.707
KKT73826.1
Isoleucyl-tRNA synthetase.
  
  
 0.697
pheS
Phenylalanine-tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
  
  
 0.695
Your Current Organism:
Collierbacteria bacterium GW2011GWB1446
NCBI taxonomy Id: 1618384
Other names: C. Collierbacteria bacterium GW2011_GWB1_44_6, Candidatus Collierbacteria bacterium GW2011_GWB1_44_6
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