STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT71659.1Formate acetyltransferase 2. (452 aa)    
Predicted Functional Partners:
KKT73857.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.965
KKT73444.1
Hypothetical protein.
    
 0.795
KKT73430.1
Glyoxylate reductase.
    
 0.772
KKT72517.1
Triosephosphate isomerase.
   
 
 0.770
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.751
KKT71818.1
Branched-chain amino acid aminotransferase 1.
    
  0.714
KKT73005.1
cAMP-binding protein.
  
 
 0.638
KKT72822.1
Hypothetical protein.
    
  0.589
KKT72911.1
Hypothetical protein.
    
  0.582
KKT72818.1
Alpha/beta hydrolase.
    
  0.582
Your Current Organism:
Collierbacteria bacterium GW2011GWB1446
NCBI taxonomy Id: 1618384
Other names: C. Collierbacteria bacterium GW2011_GWB1_44_6, Candidatus Collierbacteria bacterium GW2011_GWB1_44_6
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