STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT71664.1Glutamine-scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family. (335 aa)    
Predicted Functional Partners:
KKT73834.1
Glycosyl transferase family 2.
  
 
 0.994
KKT73735.1
Glycosyltransferase-like protein, family 2.
  
 
 0.994
KKT73699.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.979
KKT73762.1
Glycosyl transferase GT4 family.
  
 0.964
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.951
KKT73737.1
Acetyltransferase.
  
 
 0.914
KKT73757.1
Hexapeptide repeat-containing transferase.
  
 
 0.914
KKT71980.1
Sugar transferase, probable phospho-glucosyltransferase.
  
 
 0.881
KKT73746.1
GDP-6-deoxy-D-mannose reductase.
 
 
 0.880
KKT73278.1
Hypothetical protein.
  
 
 0.873
Your Current Organism:
Collierbacteria bacterium GW2011GWB1446
NCBI taxonomy Id: 1618384
Other names: C. Collierbacteria bacterium GW2011_GWB1_44_6, Candidatus Collierbacteria bacterium GW2011_GWB1_44_6
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