STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKU00537.1Tyrosyl-tRNA synthetase. (405 aa)    
Predicted Functional Partners:
KKU00506.1
Methionine-tRNA ligase.
  
 0.920
KKU01270.1
Glutamate-tRNA ligase.
  
 
 0.870
KKU00534.1
Threonine-tRNA ligase.
  
 
 0.838
KKU01110.1
Methionine-tRNA ligase.
  
 0.798
KKU00538.1
Hypothetical protein.
     
 0.792
KKU00283.1
Peptidyl-prolyl cis-trans isomerase.
  
   0.767
KKU00539.1
Histidine-tRNA ligase.
  
  
 0.760
KKU00068.1
Phenylalanine-tRNA ligase beta subunit.
 
  
 0.737
KKU00535.1
Hypothetical protein.
       0.732
KKU00536.1
PilT protein domain protein.
       0.732
Your Current Organism:
Collierbacteria bacterium GW2011GWB24517
NCBI taxonomy Id: 1618388
Other names: C. Collierbacteria bacterium GW2011_GWB2_45_17, Candidatus Collierbacteria bacterium GW2011_GWB2_45_17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.