STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT49384.1Peptidase M23/M37. (201 aa)    
Predicted Functional Partners:
KKT49383.1
Phosphoglycerate kinase.
   
   0.595
KKT48690.1
SpoIID/LytB domain protein.
     
 0.585
KKT49193.1
Hypothetical protein.
  
 
 0.584
KKT48618.1
NarL family signal transduction histidine kinase.
     
 0.583
KKT49385.1
Hypothetical protein.
       0.510
KKT49382.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
    0.492
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
 
 0.459
KKT49247.1
D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.426
KKT48757.1
D-alanyl-D-alanine serine-type carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.426
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 
  0.415
Your Current Organism:
Collierbacteria bacterium GW2011GWC24418
NCBI taxonomy Id: 1618392
Other names: C. Collierbacteria bacterium GW2011_GWC2_44_18, Candidatus Collierbacteria bacterium GW2011_GWC2_44_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.