STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS14918.1Histidine-tRNA ligase. (466 aa)    
Predicted Functional Partners:
KKS14732.1
Elongation factor G.
   
 0.855
KKS15600.1
Serine-tRNA ligase.
  
 0.750
KKS14917.1
Histidyl-tRNA synthetase.
 
    
0.674
KKS15613.1
Peptidyl-prolyl cis-trans isomerase.
    
  0.614
KKS15602.1
Lysine-tRNA ligase.
  
 
 0.564
KKS15036.1
Phenylalanine-tRNA ligase beta subunit.
  
  
 0.532
KKS15045.1
Threonine-tRNA ligase.
  
 
 0.532
KKS15248.1
Valine-tRNA ligase.
 
 
 0.509
KKS15444.1
Cell division protein FtsZ.
 
  
 0.503
KKS14503.1
Leucine-tRNA ligase.
 
 
 0.490
Your Current Organism:
Daviesbacteria bacterium GW2011GWA14161
NCBI taxonomy Id: 1618419
Other names: C. Daviesbacteria bacterium GW2011_GWA1_41_61, Candidatus Daviesbacteria bacterium GW2011_GWA1_41_61
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.