STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKS15027.1GTP-binding protein TypA/BipA. (596 aa)    
Predicted Functional Partners:
KKS14646.1
50S ribosomal protein L1.
   
    0.567
KKS15169.1
Polymerase I protein.
     
 0.506
KKS15413.1
GTPase obg.
  
  
 0.498
KKS14727.1
DNA-directed RNA polymerase subunit beta.
  
  
 0.496
KKS14860.1
Trigger factor.
  
  
 0.487
KKS14851.1
Elongation factor Ts.
  
  
 0.459
KKS14708.1
RNA-metabolising metallo-beta-lactamase.
     
 0.444
KKS14732.1
Elongation factor G.
   
  
0.431
KKS14863.1
Putative rRNA maturation factor.
   
 
 0.423
KKS15026.1
ATP-dependent RNA helicase RhlE.
  
  
 0.423
Your Current Organism:
Daviesbacteria bacterium GW2011GWA14161
NCBI taxonomy Id: 1618419
Other names: C. Daviesbacteria bacterium GW2011_GWA1_41_61, Candidatus Daviesbacteria bacterium GW2011_GWA1_41_61
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.