STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ29863.1Isoprenylcysteine carboxyl methyltransferase. (217 aa)    
Predicted Functional Partners:
KKQ29860.1
Hypothetical protein.
    
 0.909
htpX
Protease HtpX-like protein; Belongs to the peptidase M48B family.
    
 0.877
KKQ29864.1
Hypothetical protein.
       0.792
KKQ29865.1
Hypothetical protein.
       0.792
KKQ29698.1
Oxidoreductase.
    
  0.788
KKQ29862.1
Hypothetical protein.
       0.773
KKQ28393.1
Hypothetical protein.
   
 
  0.766
KKQ28295.1
Hypothetical protein.
    
  0.759
KKQ29866.1
Hypothetical protein.
       0.746
KKQ29867.1
Cytochrome c biogenesis protein transmembrane region.
  
    0.726
Your Current Organism:
Levybacteria bacterium GW2011GWA13716
NCBI taxonomy Id: 1618452
Other names: C. Levybacteria bacterium GW2011_GWA1_37_16, Candidatus Levybacteria bacterium GW2011_GWA1_37_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.