STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ28563.1Hypothetical protein; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (288 aa)    
Predicted Functional Partners:
KKQ28562.1
Cell division ATP-binding protein FtsE.
 
 
 0.999
KKQ28564.1
Hypothetical protein.
 
 
 
 0.993
KKQ28561.1
Hypothetical protein.
       0.786
KKQ28565.1
Hypothetical protein.
       0.744
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
     
 0.636
ftsA
Cell division protein ftsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
  
 
 0.574
KKQ27094.1
Hypothetical protein.
  
  
 0.561
KKQ28854.1
Single-stranded-DNA-specific exonuclease.
  
  
 0.536
KKQ28566.1
Hypothetical protein.
       0.530
KKQ29768.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
    
 0.525
Your Current Organism:
Levybacteria bacterium GW2011GWA13716
NCBI taxonomy Id: 1618452
Other names: C. Levybacteria bacterium GW2011_GWA1_37_16, Candidatus Levybacteria bacterium GW2011_GWA1_37_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.