STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ28316.1Hypothetical protein. (344 aa)    
Predicted Functional Partners:
KKQ28317.1
Hypothetical protein.
       0.775
KKQ28318.1
Glycosyl transferase group 1.
       0.775
KKQ29396.1
Polysaccharide deacetylase.
  
 
  0.647
KKQ28838.1
Dolichyl-phosphate beta-D-mannosyltransferase.
 
 
 0.634
KKQ28839.1
Hypothetical protein.
  
 
 0.585
KKQ27168.1
Glycosyl transferase family 2.
 
 
  0.583
KKQ29403.1
Hypothetical protein.
 
     0.568
KKQ29073.1
Glycosyl transferase, family 2.
  
 
  0.528
KKQ28773.1
Hypothetical protein.
  
 
  0.528
KKQ28777.1
Glycosyl transferase family 2.
  
 
  0.528
Your Current Organism:
Levybacteria bacterium GW2011GWA13716
NCBI taxonomy Id: 1618452
Other names: C. Levybacteria bacterium GW2011_GWA1_37_16, Candidatus Levybacteria bacterium GW2011_GWA1_37_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.